Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Gm27646-201ENSMUST00000183989 110 ntBASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cpsf4Q8BQZ5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Gm12350-201ENSMUST00000121208 462 ntBASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cpsf4Q8BQZ5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
Cpsf4Q8BQZ5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms