Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm21814-202ENSMUST00000203277 873 ntBASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gm7729-201ENSMUST00000050143 801 ntBASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smco3Q8BQM7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Gm26039-201ENSMUST00000158152 144 ntBASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smco3Q8BQM7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Mir5122-201ENSMUST00000175004 89 ntBASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smco3Q8BQM7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms