Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Nop53Q8BK35 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nop53Q8BK35 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.2■□□□□ 0.18
Nop53Q8BK35 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gm7506-201ENSMUST00000207758 815 ntBASIC16.2■□□□□ 0.18
Nop53Q8BK35 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.2■□□□□ 0.18
Nop53Q8BK35 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.19■□□□□ 0.18
Nop53Q8BK35 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nop53Q8BK35 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nop53Q8BK35 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nop53Q8BK35 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.17■□□□□ 0.18
Nop53Q8BK35 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.17■□□□□ 0.18
Nop53Q8BK35 Gm8655-201ENSMUST00000221159 852 ntBASIC16.17■□□□□ 0.18
Nop53Q8BK35 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms