Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp2bQ8BJF9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Chmp2bQ8BJF9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Chmp2bQ8BJF9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Gm7284-201ENSMUST00000131667 944 ntBASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chmp2bQ8BJF9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms