Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.45■□□□□ 0.22
Depdc1bQ8BH88 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Gm11779-201ENSMUST00000118541 368 ntBASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Depdc1bQ8BH88 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm13036-201ENSMUST00000117799 748 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm15467-201ENSMUST00000120582 445 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm5264-201ENSMUST00000190584 848 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm2213-201ENSMUST00000197485 688 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Depdc1bQ8BH88 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gm15358-201ENSMUST00000119249 520 ntBASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Depdc1bQ8BH88 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Depdc1bQ8BH88 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms