Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 AC149588.3-201ENSMUST00000227515 150 ntBASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rpap1Q80TE0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Gm8749-201ENSMUST00000117737 331 ntBASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Gm8602-201ENSMUST00000184045 607 ntBASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Gm27631-201ENSMUST00000184163 466 ntBASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rpap1Q80TE0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 AC149294.4-201ENSMUST00000227870 882 ntBASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Gm15823-201ENSMUST00000064305 670 ntBASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Gm9115-201ENSMUST00000120192 1348 ntBASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Rpap1Q80TE0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 AC156016.3-201ENSMUST00000228623 344 ntBASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rpap1Q80TE0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Gm37748-201ENSMUST00000194379 1140 ntBASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Tcf21-202ENSMUST00000218002 1788 ntBASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rpap1Q80TE0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Rpap1Q80TE0 Gm21854-201ENSMUST00000179901 471 ntBASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms