Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Grk6-207ENSMUST00000225925 2769 ntBASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfx4Q7TNK1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfx4Q7TNK1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Gm19164-201ENSMUST00000210667 640 ntBASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfx4Q7TNK1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfx4Q7TNK1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms