Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.64■□□□□ 0.58
Ddx58Q6Q899 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx58Q6Q899 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx58Q6Q899 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Gm10576-201ENSMUST00000191927 825 ntBASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Gm10253-201ENSMUST00000194270 940 ntBASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx58Q6Q899 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Gm24158-201ENSMUST00000175263 71 ntBASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Gm7774-201ENSMUST00000200064 533 ntBASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx58Q6Q899 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx58Q6Q899 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx58Q6Q899 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.6■□□□□ 0.57
Ddx58Q6Q899 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx58Q6Q899 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms