Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rif1Q6PR54 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.7□□□□□ -0.38
Rif1Q6PR54 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rif1Q6PR54 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.7□□□□□ -0.38
Rif1Q6PR54 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rif1Q6PR54 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Rif1Q6PR54 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rif1Q6PR54 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rif1Q6PR54 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.69□□□□□ -0.38
Rif1Q6PR54 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.69□□□□□ -0.38
Rif1Q6PR54 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Gm29787-201ENSMUST00000222129 849 ntBASIC12.69□□□□□ -0.38
Rif1Q6PR54 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.69□□□□□ -0.38
Rif1Q6PR54 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rif1Q6PR54 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.68□□□□□ -0.38
Rif1Q6PR54 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.68□□□□□ -0.38
Rif1Q6PR54 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm5370-201ENSMUST00000187187 574 ntBASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm6013-201ENSMUST00000212264 699 ntBASIC12.68□□□□□ -0.38
Rif1Q6PR54 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rif1Q6PR54 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.68□□□□□ -0.38
Rif1Q6PR54 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.67□□□□□ -0.38
Rif1Q6PR54 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms