Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smarcd3Q6P9Z1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Gm12497-201ENSMUST00000138778 237 ntBASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcd3Q6P9Z1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Gm33142-201ENSMUST00000193913 867 ntBASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd3Q6P9Z1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms