Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm18195-201ENSMUST00000207604 706 ntBASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac4Q6NZM9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Gm27628-201ENSMUST00000184911 107 ntBASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Gm15590-201ENSMUST00000078419 552 ntBASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hdac4Q6NZM9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hdac4Q6NZM9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
Hdac4Q6NZM9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hdac4Q6NZM9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hdac4Q6NZM9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Gm12350-201ENSMUST00000121208 462 ntBASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.88■□□□□ 0.29
Hdac4Q6NZM9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hdac4Q6NZM9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms