Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Dupd1-202ENSMUST00000224735 548 ntBASIC14.11□□□□□ -0.15
AtmQ62388 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AtmQ62388 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AtmQ62388 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
AtmQ62388 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Gm28760-201ENSMUST00000185995 736 ntBASIC14.1□□□□□ -0.15
AtmQ62388 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AtmQ62388 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
AtmQ62388 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
AtmQ62388 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
AtmQ62388 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.1□□□□□ -0.15
AtmQ62388 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.1□□□□□ -0.15
AtmQ62388 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.1□□□□□ -0.15
AtmQ62388 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AtmQ62388 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.1□□□□□ -0.15
AtmQ62388 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Gm14722-201ENSMUST00000118943 689 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.09□□□□□ -0.15
AtmQ62388 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AtmQ62388 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.09□□□□□ -0.15
AtmQ62388 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
AtmQ62388 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
AtmQ62388 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AtmQ62388 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.09□□□□□ -0.15
AtmQ62388 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
AtmQ62388 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AtmQ62388 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.09□□□□□ -0.15
AtmQ62388 Gm3436-201ENSMUST00000179930 840 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.09□□□□□ -0.15
AtmQ62388 Gm9797-201ENSMUST00000052902 613 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Gm15823-201ENSMUST00000064305 670 ntBASIC14.09□□□□□ -0.15
AtmQ62388 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.09□□□□□ -0.15
AtmQ62388 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
AtmQ62388 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AtmQ62388 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.08□□□□□ -0.16
AtmQ62388 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.08□□□□□ -0.16
AtmQ62388 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.08□□□□□ -0.16
AtmQ62388 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
AtmQ62388 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.08□□□□□ -0.16
AtmQ62388 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.08□□□□□ -0.16
AtmQ62388 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Gm9522-201ENSMUST00000182394 926 ntBASIC14.08□□□□□ -0.16
AtmQ62388 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
AtmQ62388 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AtmQ62388 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.07□□□□□ -0.16
AtmQ62388 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.07□□□□□ -0.16
AtmQ62388 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.07□□□□□ -0.16
AtmQ62388 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.07□□□□□ -0.16
AtmQ62388 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AtmQ62388 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms