Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.01□□□□□ -0.17
VcanQ62059 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm7584-201ENSMUST00000175829 940 ntBASIC14.01□□□□□ -0.17
VcanQ62059 Gm2495-201ENSMUST00000191160 466 ntBASIC14.01□□□□□ -0.17
VcanQ62059 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Gm7399-201ENSMUST00000032395 858 ntBASIC14.01□□□□□ -0.17
VcanQ62059 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VcanQ62059 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VcanQ62059 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
VcanQ62059 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14□□□□□ -0.17
VcanQ62059 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14□□□□□ -0.17
VcanQ62059 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VcanQ62059 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VcanQ62059 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14□□□□□ -0.17
VcanQ62059 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VcanQ62059 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14□□□□□ -0.17
VcanQ62059 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
VcanQ62059 Gm28911-201ENSMUST00000188837 117 ntBASIC14□□□□□ -0.17
VcanQ62059 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14□□□□□ -0.17
VcanQ62059 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14□□□□□ -0.17
VcanQ62059 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VcanQ62059 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14□□□□□ -0.17
VcanQ62059 Gm27731-201ENSMUST00000185192 107 ntBASIC14□□□□□ -0.17
VcanQ62059 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14□□□□□ -0.17
VcanQ62059 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14□□□□□ -0.17
VcanQ62059 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VcanQ62059 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 Mir6392-201ENSMUST00000184924 108 ntBASIC13.99□□□□□ -0.17
VcanQ62059 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VcanQ62059 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VcanQ62059 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.99□□□□□ -0.17
VcanQ62059 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.99□□□□□ -0.17
VcanQ62059 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
VcanQ62059 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VcanQ62059 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
VcanQ62059 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.99□□□□□ -0.17
VcanQ62059 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.98□□□□□ -0.17
VcanQ62059 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.98□□□□□ -0.17
VcanQ62059 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.98□□□□□ -0.17
VcanQ62059 Dupd1-202ENSMUST00000224735 548 ntBASIC13.98□□□□□ -0.17
VcanQ62059 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Gm18753-201ENSMUST00000201000 566 ntBASIC13.98□□□□□ -0.17
VcanQ62059 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms