Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clns1aQ61189 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Clns1aQ61189 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clns1aQ61189 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.96□□□□□ -0.34
Clns1aQ61189 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.95□□□□□ -0.34
Clns1aQ61189 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.95□□□□□ -0.34
Clns1aQ61189 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clns1aQ61189 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.94□□□□□ -0.34
Clns1aQ61189 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.94□□□□□ -0.34
Clns1aQ61189 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.94□□□□□ -0.34
Clns1aQ61189 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Clns1aQ61189 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.94□□□□□ -0.34
Clns1aQ61189 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clns1aQ61189 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.93□□□□□ -0.34
Clns1aQ61189 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.93□□□□□ -0.34
Clns1aQ61189 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Gm30025-201ENSMUST00000218555 728 ntBASIC12.93□□□□□ -0.34
Clns1aQ61189 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.93□□□□□ -0.34
Clns1aQ61189 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clns1aQ61189 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms