Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Shroom1Q5SX79 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Gm5312-201ENSMUST00000203728 547 ntBASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shroom1Q5SX79 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gm13365-201ENSMUST00000121188 973 ntBASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Rpph1-201ENSMUST00000175096 319 ntBASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shroom1Q5SX79 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 BC037039-201ENSMUST00000192003 2205 ntBASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Gm20553-201ENSMUST00000204205 844 ntBASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shroom1Q5SX79 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.04■□□□□ 0.16
Shroom1Q5SX79 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Gm11745-201ENSMUST00000121669 448 ntBASIC16.04■□□□□ 0.16
Shroom1Q5SX79 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Rprl2-201ENSMUST00000157150 290 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms