Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav7-2Q5R1I3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm12644-201ENSMUST00000119935 606 ntBASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm27867-201ENSMUST00000184778 125 ntBASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav7-2Q5R1I3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav7-2Q5R1I3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav7-2Q5R1I3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms