Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Gm10698-201ENSMUST00000182663 604 ntBASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Gm20049-201ENSMUST00000219950 730 ntBASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7d-4Q5R1H9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7d-4Q5R1H9 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms