Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm37055-201ENSMUST00000191866 133 ntBASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm8825-201ENSMUST00000182565 998 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm4518-201ENSMUST00000182638 718 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms