Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx49Q4FZF3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx49Q4FZF3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx49Q4FZF3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx49Q4FZF3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx49Q4FZF3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Gm11543-201ENSMUST00000120758 370 ntBASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx49Q4FZF3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Gm14722-201ENSMUST00000118943 689 ntBASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx49Q4FZF3 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Gm18737-201ENSMUST00000173594 937 ntBASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Gm38225-201ENSMUST00000194001 393 ntBASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx49Q4FZF3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx49Q4FZF3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms