Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf38aQ4FK66 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf38aQ4FK66 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.58■□□□□ 0.41
Prpf38aQ4FK66 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf38aQ4FK66 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Prpf38aQ4FK66 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.58■□□□□ 0.41
Prpf38aQ4FK66 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf38aQ4FK66 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf38aQ4FK66 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Gm11543-201ENSMUST00000120758 370 ntBASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Auts2-212ENSMUST00000178555 309 ntBASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Mir6956-201ENSMUST00000183598 62 ntBASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prpf38aQ4FK66 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf38aQ4FK66 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms