Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Mir6392-201ENSMUST00000184924 108 ntBASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Gm27892-201ENSMUST00000185017 106 ntBASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fam196aQ3USH1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Fam196aQ3USH1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Fam196aQ3USH1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Fam196aQ3USH1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.08■□□□□ 0.01
Fam196aQ3USH1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Fam196aQ3USH1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Gm28760-201ENSMUST00000185995 736 ntBASIC15.08■□□□□ 0
Fam196aQ3USH1 Gm5035-201ENSMUST00000215581 927 ntBASIC15.08■□□□□ 0
Fam196aQ3USH1 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.08■□□□□ 0
Fam196aQ3USH1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Fam196aQ3USH1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Fam196aQ3USH1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.07■□□□□ 0
Fam196aQ3USH1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.07■□□□□ 0
Fam196aQ3USH1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms