Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccbe1Q3MI99 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccbe1Q3MI99 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Gm13158-201ENSMUST00000122007 736 ntBASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccbe1Q3MI99 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Gm12008-201ENSMUST00000117791 755 ntBASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Gm5417-201ENSMUST00000079706 384 ntBASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccbe1Q3MI99 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms