Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Mir770-201ENSMUST00000103252 94 ntBASIC14.05□□□□□ -0.16
SgcdP82347 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Gm28659-201ENSMUST00000188013 759 ntBASIC14.05□□□□□ -0.16
SgcdP82347 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.05□□□□□ -0.16
SgcdP82347 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
SgcdP82347 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.05□□□□□ -0.16
SgcdP82347 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SgcdP82347 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SgcdP82347 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SgcdP82347 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
SgcdP82347 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
SgcdP82347 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SgcdP82347 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
SgcdP82347 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SgcdP82347 Gm45328-201ENSMUST00000210942 917 ntBASIC14.04□□□□□ -0.16
SgcdP82347 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.04□□□□□ -0.16
SgcdP82347 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SgcdP82347 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SgcdP82347 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.04□□□□□ -0.16
SgcdP82347 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.03□□□□□ -0.16
SgcdP82347 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SgcdP82347 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SgcdP82347 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SgcdP82347 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Gm11336-201ENSMUST00000118168 334 ntBASIC14.03□□□□□ -0.16
SgcdP82347 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.03□□□□□ -0.16
SgcdP82347 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
SgcdP82347 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.03□□□□□ -0.16
SgcdP82347 Gm27357-201ENSMUST00000183754 135 ntBASIC14.03□□□□□ -0.16
SgcdP82347 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.03□□□□□ -0.16
SgcdP82347 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SgcdP82347 Gm10566-201ENSMUST00000086739 996 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms