Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.89■□□□□ 0.93
Stra8P70278 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Stra8P70278 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.89■□□□□ 0.93
Stra8P70278 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.89■□□□□ 0.93
Stra8P70278 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stra8P70278 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stra8P70278 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stra8P70278 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Stra8P70278 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Stra8P70278 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Stra8P70278 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Stra8P70278 Gm25745-201ENSMUST00000174945 133 ntBASIC20.88■□□□□ 0.93
Stra8P70278 Gm45504-201ENSMUST00000211407 2107 ntBASIC20.88■□□□□ 0.93
Stra8P70278 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Stra8P70278 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Stra8P70278 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Stra8P70278 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
Stra8P70278 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Stra8P70278 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Stra8P70278 Gm12620-201ENSMUST00000119791 1986 ntBASIC20.87■□□□□ 0.93
Stra8P70278 Gm12612-201ENSMUST00000140182 1986 ntBASIC20.87■□□□□ 0.93
Stra8P70278 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Stra8P70278 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.87■□□□□ 0.93
Stra8P70278 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.87■□□□□ 0.93
Stra8P70278 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.87■□□□□ 0.93
Stra8P70278 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.87■□□□□ 0.93
Stra8P70278 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Stra8P70278 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Stra8P70278 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Stra8P70278 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Stra8P70278 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Stra8P70278 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Stra8P70278 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Stra8P70278 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.86■□□□□ 0.93
Stra8P70278 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Stra8P70278 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Stra8P70278 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Stra8P70278 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Stra8P70278 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.86■□□□□ 0.93
Stra8P70278 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC20.85■□□□□ 0.93
Stra8P70278 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.85■□□□□ 0.93
Stra8P70278 Gm12644-201ENSMUST00000119935 606 ntBASIC20.85■□□□□ 0.93
Stra8P70278 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.85■□□□□ 0.93
Stra8P70278 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.85■□□□□ 0.93
Stra8P70278 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.85■□□□□ 0.93
Stra8P70278 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Stra8P70278 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Stra8P70278 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms