Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ybx1P62960 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ybx1P62960 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ybx1P62960 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.47■□□□□ 0.07
Ybx1P62960 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ybx1P62960 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.46■□□□□ 0.07
Ybx1P62960 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Ybx1P62960 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.46■□□□□ 0.07
Ybx1P62960 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ybx1P62960 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ybx1P62960 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ybx1P62960 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ybx1P62960 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ybx1P62960 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ybx1P62960 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ybx1P62960 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ybx1P62960 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.46■□□□□ 0.06
Ybx1P62960 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ybx1P62960 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ybx1P62960 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Ybx1P62960 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Ybx1P62960 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.45■□□□□ 0.06
Ybx1P62960 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ybx1P62960 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ybx1P62960 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.45■□□□□ 0.06
Ybx1P62960 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.45■□□□□ 0.06
Ybx1P62960 Gm15483-201ENSMUST00000120338 456 ntBASIC15.45■□□□□ 0.06
Ybx1P62960 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.45■□□□□ 0.06
Ybx1P62960 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.45■□□□□ 0.06
Ybx1P62960 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
Ybx1P62960 Gm16026-204ENSMUST00000162652 683 ntBASIC15.45■□□□□ 0.06
Ybx1P62960 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ybx1P62960 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.45■□□□□ 0.06
Ybx1P62960 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ybx1P62960 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ybx1P62960 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Gm15693-201ENSMUST00000120470 637 ntBASIC15.44■□□□□ 0.06
Ybx1P62960 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.44■□□□□ 0.06
Ybx1P62960 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.44■□□□□ 0.06
Ybx1P62960 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Ybx1P62960 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Ybx1P62960 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ybx1P62960 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Ybx1P62960 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.43■□□□□ 0.06
Ybx1P62960 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms