Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Sec61a1P61620 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sec61a1P61620 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Sec61a1P61620 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sec61a1P61620 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sec61a1P61620 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sec61a1P61620 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sec61a1P61620 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sec61a1P61620 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sec61a1P61620 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.32□□□□□ -0.28
Sec61a1P61620 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.31□□□□□ -0.28
Sec61a1P61620 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sec61a1P61620 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.31□□□□□ -0.28
Sec61a1P61620 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sec61a1P61620 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms