Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Cdh11P55288 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh11P55288 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Gm6257-201ENSMUST00000163864 910 ntBASIC13.79□□□□□ -0.2
Cdh11P55288 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh11P55288 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh11P55288 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.79□□□□□ -0.2
Cdh11P55288 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Cdh11P55288 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cdh11P55288 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cdh11P55288 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdh11P55288 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.78□□□□□ -0.2
Cdh11P55288 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.78□□□□□ -0.2
Cdh11P55288 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cdh11P55288 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Cdh11P55288 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cdh11P55288 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdh11P55288 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
Cdh11P55288 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cdh11P55288 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdh11P55288 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdh11P55288 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44357-201ENSMUST00000195897 142 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm19658-201ENSMUST00000196231 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44367-201ENSMUST00000196836 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44350-201ENSMUST00000197197 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44390-201ENSMUST00000197533 144 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44313-201ENSMUST00000198018 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44486-201ENSMUST00000198508 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44314-201ENSMUST00000199263 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44394-201ENSMUST00000199558 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44484-201ENSMUST00000199873 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44466-201ENSMUST00000200264 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Gm44359-201ENSMUST00000200671 138 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdh11P55288 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh11P55288 Efs-202ENSMUST00000227037 2540 ntBASIC13.77□□□□□ -0.21
Cdh11P55288 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms