Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Sox3P53784 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox3P53784 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox3P53784 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sox3P53784 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Sox3P53784 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Gm25406-201ENSMUST00000157599 105 ntBASIC14.47□□□□□ -0.09
Sox3P53784 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
Sox3P53784 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.47□□□□□ -0.09
Sox3P53784 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sox3P53784 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.47□□□□□ -0.09
Sox3P53784 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sox3P53784 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox3P53784 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.46□□□□□ -0.09
Sox3P53784 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox3P53784 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.46□□□□□ -0.09
Sox3P53784 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sox3P53784 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.46□□□□□ -0.09
Sox3P53784 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.46□□□□□ -0.09
Sox3P53784 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.46□□□□□ -0.09
Sox3P53784 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sox3P53784 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sox3P53784 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox3P53784 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Sox3P53784 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox3P53784 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sox3P53784 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox3P53784 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Gm11424-201ENSMUST00000121929 829 ntBASIC14.45□□□□□ -0.1
Sox3P53784 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Sox3P53784 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Gm17968-201ENSMUST00000194902 784 ntBASIC14.45□□□□□ -0.1
Sox3P53784 Gm43767-201ENSMUST00000198933 381 ntBASIC14.45□□□□□ -0.1
Sox3P53784 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.45□□□□□ -0.1
Sox3P53784 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.45□□□□□ -0.1
Sox3P53784 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.45□□□□□ -0.1
Sox3P53784 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox3P53784 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sox3P53784 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sox3P53784 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sox3P53784 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.44□□□□□ -0.1
Sox3P53784 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sox3P53784 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms