Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Sox1P53783 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Sox1P53783 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
Sox1P53783 Gm38241-201ENSMUST00000192641 898 ntBASIC15.37■□□□□ 0.05
Sox1P53783 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.37■□□□□ 0.05
Sox1P53783 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.37■□□□□ 0.05
Sox1P53783 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.37■□□□□ 0.05
Sox1P53783 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.37■□□□□ 0.05
Sox1P53783 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox1P53783 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sox1P53783 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sox1P53783 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.36■□□□□ 0.05
Sox1P53783 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.36■□□□□ 0.05
Sox1P53783 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Sox1P53783 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.36■□□□□ 0.05
Sox1P53783 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.36■□□□□ 0.05
Sox1P53783 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.36■□□□□ 0.05
Sox1P53783 Gm26461-201ENSMUST00000175064 290 ntBASIC15.36■□□□□ 0.05
Sox1P53783 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.36■□□□□ 0.05
Sox1P53783 Gm28911-201ENSMUST00000188837 117 ntBASIC15.36■□□□□ 0.05
Sox1P53783 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.36■□□□□ 0.05
Sox1P53783 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox1P53783 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.35■□□□□ 0.05
Sox1P53783 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.35■□□□□ 0.05
Sox1P53783 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Sox1P53783 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Gm3436-201ENSMUST00000179930 840 ntBASIC15.35■□□□□ 0.05
Sox1P53783 Gm27839-201ENSMUST00000184242 106 ntBASIC15.35■□□□□ 0.05
Sox1P53783 Gm27701-201ENSMUST00000184498 110 ntBASIC15.35■□□□□ 0.05
Sox1P53783 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.35■□□□□ 0.05
Sox1P53783 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.35■□□□□ 0.05
Sox1P53783 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.35■□□□□ 0.05
Sox1P53783 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.35■□□□□ 0.05
Sox1P53783 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Sox1P53783 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sox1P53783 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.35■□□□□ 0.05
Sox1P53783 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox1P53783 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox1P53783 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sox1P53783 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox1P53783 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.34■□□□□ 0.05
Sox1P53783 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sox1P53783 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox1P53783 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.34■□□□□ 0.05
Sox1P53783 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox1P53783 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Gm37466-201ENSMUST00000195692 652 ntBASIC15.34■□□□□ 0.05
Sox1P53783 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.34■□□□□ 0.05
Sox1P53783 Gm18056-201ENSMUST00000207670 568 ntBASIC15.34■□□□□ 0.05
Sox1P53783 Gm18061-201ENSMUST00000208350 562 ntBASIC15.34■□□□□ 0.05
Sox1P53783 Gm18063-201ENSMUST00000208529 568 ntBASIC15.34■□□□□ 0.05
Sox1P53783 Gm18052-201ENSMUST00000208750 559 ntBASIC15.34■□□□□ 0.05
Sox1P53783 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.34■□□□□ 0.05
Sox1P53783 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox1P53783 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms