Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RoraP51448 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RoraP51448 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RoraP51448 Gm12008-201ENSMUST00000117791 755 ntBASIC14.29□□□□□ -0.12
RoraP51448 Mir1895-201ENSMUST00000122615 79 ntBASIC14.29□□□□□ -0.12
RoraP51448 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.29□□□□□ -0.12
RoraP51448 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.29□□□□□ -0.12
RoraP51448 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RoraP51448 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.29□□□□□ -0.12
RoraP51448 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.29□□□□□ -0.12
RoraP51448 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.29□□□□□ -0.12
RoraP51448 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
RoraP51448 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.29□□□□□ -0.12
RoraP51448 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RoraP51448 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RoraP51448 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RoraP51448 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RoraP51448 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.28□□□□□ -0.12
RoraP51448 Gm10499-201ENSMUST00000174094 934 ntBASIC14.28□□□□□ -0.12
RoraP51448 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.28□□□□□ -0.12
RoraP51448 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RoraP51448 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.28□□□□□ -0.12
RoraP51448 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.28□□□□□ -0.12
RoraP51448 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RoraP51448 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RoraP51448 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RoraP51448 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RoraP51448 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.27□□□□□ -0.12
RoraP51448 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.27□□□□□ -0.12
RoraP51448 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RoraP51448 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RoraP51448 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RoraP51448 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RoraP51448 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.27□□□□□ -0.12
RoraP51448 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RoraP51448 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.27□□□□□ -0.13
RoraP51448 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.27□□□□□ -0.13
RoraP51448 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.27□□□□□ -0.13
RoraP51448 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RoraP51448 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.27□□□□□ -0.13
RoraP51448 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.27□□□□□ -0.13
RoraP51448 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RoraP51448 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RoraP51448 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RoraP51448 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
RoraP51448 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RoraP51448 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RoraP51448 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RoraP51448 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.26□□□□□ -0.13
RoraP51448 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RoraP51448 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.26□□□□□ -0.13
RoraP51448 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.26□□□□□ -0.13
RoraP51448 Gm11025-201ENSMUST00000140773 466 ntBASIC14.26□□□□□ -0.13
RoraP51448 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RoraP51448 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RoraP51448 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms