Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4bP46467 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4bP46467 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Vps4bP46467 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4bP46467 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4bP46467 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.33■□□□□ 0.05
Vps4bP46467 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps4bP46467 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps4bP46467 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps4bP46467 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps4bP46467 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Vps4bP46467 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps4bP46467 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps4bP46467 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps4bP46467 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4bP46467 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Vps4bP46467 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps4bP46467 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps4bP46467 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Gm18733-201ENSMUST00000173950 856 ntBASIC15.32■□□□□ 0.04
Vps4bP46467 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vps4bP46467 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.32■□□□□ 0.04
Vps4bP46467 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4bP46467 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.31■□□□□ 0.04
Vps4bP46467 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps4bP46467 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps4bP46467 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps4bP46467 Gm43347-201ENSMUST00000200226 580 ntBASIC15.31■□□□□ 0.04
Vps4bP46467 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps4bP46467 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vps4bP46467 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps4bP46467 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps4bP46467 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps4bP46467 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4bP46467 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.31■□□□□ 0.04
Vps4bP46467 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps4bP46467 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4bP46467 Gm13884-201ENSMUST00000118103 829 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.3■□□□□ 0.04
Vps4bP46467 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms