Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.29□□□□□ -0.12
Nkx2-6P43688 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nkx2-6P43688 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm25287-201ENSMUST00000103846 110 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm22918-201ENSMUST00000103855 110 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm43474-201ENSMUST00000196415 774 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Gm18057-201ENSMUST00000208220 503 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.28□□□□□ -0.12
Nkx2-6P43688 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-6P43688 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.27□□□□□ -0.12
Nkx2-6P43688 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-6P43688 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Gm7063-201ENSMUST00000186840 981 ntBASIC14.27□□□□□ -0.13
Nkx2-6P43688 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.27□□□□□ -0.13
Nkx2-6P43688 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm22065-201ENSMUST00000103753 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm22066-201ENSMUST00000103761 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24932-201ENSMUST00000103763 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24115-201ENSMUST00000103799 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm22190-201ENSMUST00000103827 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm22191-201ENSMUST00000103831 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24721-201ENSMUST00000103849 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm28018-201ENSMUST00000103869 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm26399-201ENSMUST00000103937 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms