Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a13P31649 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a13P31649 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a13P31649 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a13P31649 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a13P31649 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a13P31649 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.33■□□□□ 0.05
Slc6a13P31649 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a13P31649 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc6a13P31649 Gm18206-201ENSMUST00000207027 926 ntBASIC15.33■□□□□ 0.04
Slc6a13P31649 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a13P31649 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Slc6a13P31649 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a13P31649 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Slc6a13P31649 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a13P31649 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a13P31649 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a13P31649 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Slc6a13P31649 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.32■□□□□ 0.04
Slc6a13P31649 Gm27525-201ENSMUST00000184465 107 ntBASIC15.32■□□□□ 0.04
Slc6a13P31649 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc6a13P31649 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a13P31649 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a13P31649 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a13P31649 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Slc6a13P31649 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a13P31649 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a13P31649 Gm43767-201ENSMUST00000198933 381 ntBASIC15.31■□□□□ 0.04
Slc6a13P31649 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a13P31649 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slc6a13P31649 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a13P31649 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slc6a13P31649 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms