Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.03■□□□□ -0
Nckap1P28660 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Gm18057-201ENSMUST00000208220 503 ntBASIC15.03■□□□□ -0
Nckap1P28660 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.03■□□□□ -0
Nckap1P28660 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.03■□□□□ -0
Nckap1P28660 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.03■□□□□ -0
Nckap1P28660 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.03■□□□□ -0
Nckap1P28660 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nckap1P28660 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.03■□□□□ -0
Nckap1P28660 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Nckap1P28660 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nckap1P28660 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nckap1P28660 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.02■□□□□ -0
Nckap1P28660 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Gm43474-201ENSMUST00000196415 774 ntBASIC15.02■□□□□ -0
Nckap1P28660 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.02■□□□□ -0
Nckap1P28660 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.02■□□□□ -0
Nckap1P28660 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Nckap1P28660 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nckap1P28660 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nckap1P28660 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Nckap1P28660 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nckap1P28660 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nckap1P28660 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nckap1P28660 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
Nckap1P28660 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Nckap1P28660 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nckap1P28660 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.01□□□□□ -0.01
Nckap1P28660 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Nckap1P28660 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.01□□□□□ -0.01
Nckap1P28660 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.01□□□□□ -0.01
Nckap1P28660 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.01□□□□□ -0.01
Nckap1P28660 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nckap1P28660 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.01□□□□□ -0.01
Nckap1P28660 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nckap1P28660 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.01□□□□□ -0.01
Nckap1P28660 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15□□□□□ -0.01
Nckap1P28660 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15□□□□□ -0.01
Nckap1P28660 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nckap1P28660 Fgf17-202ENSMUST00000227123 1336 ntBASIC15□□□□□ -0.01
Nckap1P28660 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nckap1P28660 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15□□□□□ -0.01
Nckap1P28660 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15□□□□□ -0.01
Nckap1P28660 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15□□□□□ -0.01
Nckap1P28660 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15□□□□□ -0.01
Nckap1P28660 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nckap1P28660 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15□□□□□ -0.01
Nckap1P28660 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nckap1P28660 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nckap1P28660 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nckap1P28660 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms