Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.51■□□□□ 0.39
Pde6aP27664 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Gm4995-201ENSMUST00000117247 432 ntBASIC17.51■□□□□ 0.39
Pde6aP27664 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Mir3113-201ENSMUST00000175478 76 ntBASIC17.51■□□□□ 0.39
Pde6aP27664 Gm8000-201ENSMUST00000188378 592 ntBASIC17.51■□□□□ 0.39
Pde6aP27664 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.51■□□□□ 0.39
Pde6aP27664 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Gm10175-201ENSMUST00000086013 645 ntBASIC17.51■□□□□ 0.39
Pde6aP27664 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.51■□□□□ 0.39
Pde6aP27664 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pde6aP27664 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pde6aP27664 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.5■□□□□ 0.39
Pde6aP27664 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.5■□□□□ 0.39
Pde6aP27664 Mir8117-201ENSMUST00000184773 107 ntBASIC17.5■□□□□ 0.39
Pde6aP27664 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.5■□□□□ 0.39
Pde6aP27664 Gm44492-201ENSMUST00000197012 141 ntBASIC17.5■□□□□ 0.39
Pde6aP27664 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.5■□□□□ 0.39
Pde6aP27664 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.5■□□□□ 0.39
Pde6aP27664 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pde6aP27664 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pde6aP27664 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.5■□□□□ 0.39
Pde6aP27664 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.5■□□□□ 0.39
Pde6aP27664 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.5■□□□□ 0.39
Pde6aP27664 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pde6aP27664 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pde6aP27664 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.5■□□□□ 0.39
Pde6aP27664 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Pde6aP27664 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pde6aP27664 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.49■□□□□ 0.39
Pde6aP27664 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.49■□□□□ 0.39
Pde6aP27664 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.49■□□□□ 0.39
Pde6aP27664 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.49■□□□□ 0.39
Pde6aP27664 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.49■□□□□ 0.39
Pde6aP27664 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.49■□□□□ 0.39
Pde6aP27664 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.49■□□□□ 0.39
Pde6aP27664 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.49■□□□□ 0.39
Pde6aP27664 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pde6aP27664 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pde6aP27664 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.48■□□□□ 0.39
Pde6aP27664 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Pde6aP27664 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.48■□□□□ 0.39
Pde6aP27664 Gm2272-201ENSMUST00000194903 582 ntBASIC17.48■□□□□ 0.39
Pde6aP27664 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.48■□□□□ 0.39
Pde6aP27664 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.48■□□□□ 0.39
Pde6aP27664 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms