Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.16■□□□□ 0.18
Aldh1a1P24549 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.16■□□□□ 0.18
Aldh1a1P24549 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Aldh1a1P24549 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.15■□□□□ 0.18
Aldh1a1P24549 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.15■□□□□ 0.18
Aldh1a1P24549 Gm5566-201ENSMUST00000116118 459 ntBASIC16.15■□□□□ 0.18
Aldh1a1P24549 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.15■□□□□ 0.18
Aldh1a1P24549 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Aldh1a1P24549 Asic1-205ENSMUST00000228185 1818 ntBASIC16.15■□□□□ 0.18
Aldh1a1P24549 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Aldh1a1P24549 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.14■□□□□ 0.18
Aldh1a1P24549 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Aldh1a1P24549 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gm14928-201ENSMUST00000120198 477 ntBASIC16.14■□□□□ 0.17
Aldh1a1P24549 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gm8515-201ENSMUST00000194852 576 ntBASIC16.14■□□□□ 0.17
Aldh1a1P24549 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.14■□□□□ 0.17
Aldh1a1P24549 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aldh1a1P24549 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.13■□□□□ 0.17
Aldh1a1P24549 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.13■□□□□ 0.17
Aldh1a1P24549 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aldh1a1P24549 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms