Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RarbP22605 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RarbP22605 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RarbP22605 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.7■□□□□ 0.26
RarbP22605 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.7■□□□□ 0.26
RarbP22605 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Gm13823-201ENSMUST00000119930 345 ntBASIC16.7■□□□□ 0.26
RarbP22605 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.7■□□□□ 0.26
RarbP22605 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RarbP22605 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RarbP22605 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.7■□□□□ 0.26
RarbP22605 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RarbP22605 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.7■□□□□ 0.26
RarbP22605 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.7■□□□□ 0.26
RarbP22605 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RarbP22605 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.7■□□□□ 0.26
RarbP22605 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RarbP22605 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.7■□□□□ 0.26
RarbP22605 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
RarbP22605 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RarbP22605 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.69■□□□□ 0.26
RarbP22605 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.69■□□□□ 0.26
RarbP22605 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
RarbP22605 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RarbP22605 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.69■□□□□ 0.26
RarbP22605 Gm43438-201ENSMUST00000198133 379 ntBASIC16.69■□□□□ 0.26
RarbP22605 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.69■□□□□ 0.26
RarbP22605 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.69■□□□□ 0.26
RarbP22605 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
RarbP22605 Gm2423-201ENSMUST00000074863 733 ntBASIC16.69■□□□□ 0.26
RarbP22605 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RarbP22605 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.69■□□□□ 0.26
RarbP22605 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RarbP22605 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RarbP22605 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RarbP22605 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RarbP22605 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RarbP22605 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RarbP22605 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RarbP22605 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.68■□□□□ 0.26
RarbP22605 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RarbP22605 Gm25144-201ENSMUST00000179561 110 ntBASIC16.68■□□□□ 0.26
RarbP22605 Gm25352-201ENSMUST00000179815 110 ntBASIC16.68■□□□□ 0.26
RarbP22605 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.68■□□□□ 0.26
RarbP22605 Gm18049-201ENSMUST00000208909 581 ntBASIC16.68■□□□□ 0.26
RarbP22605 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RarbP22605 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RarbP22605 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.68■□□□□ 0.26
RarbP22605 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RarbP22605 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RarbP22605 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.68■□□□□ 0.26
RarbP22605 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RarbP22605 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.67■□□□□ 0.26
RarbP22605 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.67■□□□□ 0.26
RarbP22605 Gm15483-201ENSMUST00000120338 456 ntBASIC16.67■□□□□ 0.26
RarbP22605 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RarbP22605 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RarbP22605 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RarbP22605 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms