Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.45■□□□□ 0.38
Usp53P15975 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.45■□□□□ 0.38
Usp53P15975 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Usp53P15975 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp53P15975 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
Usp53P15975 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp53P15975 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Usp53P15975 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp53P15975 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp53P15975 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.45■□□□□ 0.38
Usp53P15975 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.45■□□□□ 0.38
Usp53P15975 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp53P15975 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp53P15975 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp53P15975 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp53P15975 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Usp53P15975 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Usp53P15975 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.44■□□□□ 0.38
Usp53P15975 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.44■□□□□ 0.38
Usp53P15975 Gm16026-204ENSMUST00000162652 683 ntBASIC17.44■□□□□ 0.38
Usp53P15975 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.44■□□□□ 0.38
Usp53P15975 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Usp53P15975 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.44■□□□□ 0.38
Usp53P15975 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Usp53P15975 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp53P15975 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp53P15975 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp53P15975 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Usp53P15975 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Gm18889-201ENSMUST00000174284 929 ntBASIC17.43■□□□□ 0.38
Usp53P15975 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Usp53P15975 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Usp53P15975 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp53P15975 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp53P15975 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Usp53P15975 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms