Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.43□□□□□ -0.74
Smim1P0C8K7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smim1P0C8K7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.42□□□□□ -0.74
Smim1P0C8K7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.42□□□□□ -0.74
Smim1P0C8K7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smim1P0C8K7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.41□□□□□ -0.74
Smim1P0C8K7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm11249-201ENSMUST00000117071 859 ntBASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm2011-201ENSMUST00000203124 1263 ntBASIC10.41□□□□□ -0.74
Smim1P0C8K7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Gm10493-201ENSMUST00000097270 612 ntBASIC10.41□□□□□ -0.74
Smim1P0C8K7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms