Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Grk6-207ENSMUST00000225925 2769 ntBASIC12.63□□□□□ -0.39
CfdP03953 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CfdP03953 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm11355-201ENSMUST00000121120 306 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.63□□□□□ -0.39
CfdP03953 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm8825-201ENSMUST00000182565 998 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm4518-201ENSMUST00000182638 718 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.63□□□□□ -0.39
CfdP03953 Gm8520-201ENSMUST00000186517 868 ntBASIC12.63□□□□□ -0.39
CfdP03953 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.63□□□□□ -0.39
CfdP03953 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm18101-201ENSMUST00000215769 548 ntBASIC12.63□□□□□ -0.39
CfdP03953 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.63□□□□□ -0.39
CfdP03953 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.63□□□□□ -0.39
CfdP03953 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.63□□□□□ -0.39
CfdP03953 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CfdP03953 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CfdP03953 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.63□□□□□ -0.39
CfdP03953 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.62□□□□□ -0.39
CfdP03953 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.62□□□□□ -0.39
CfdP03953 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CfdP03953 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.62□□□□□ -0.39
CfdP03953 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CfdP03953 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.62□□□□□ -0.39
CfdP03953 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.62□□□□□ -0.39
CfdP03953 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CfdP03953 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.62□□□□□ -0.39
CfdP03953 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CfdP03953 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CfdP03953 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CfdP03953 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CfdP03953 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CfdP03953 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CfdP03953 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.61□□□□□ -0.39
CfdP03953 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CfdP03953 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CfdP03953 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms