Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cldn1O88551 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.96□□□□□ -0.33
Cldn1O88551 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cldn1O88551 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cldn1O88551 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.96□□□□□ -0.33
Cldn1O88551 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cldn1O88551 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cldn1O88551 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Gm9385-201ENSMUST00000117563 472 ntBASIC12.96□□□□□ -0.33
Cldn1O88551 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.96□□□□□ -0.33
Cldn1O88551 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldn1O88551 Gm19164-201ENSMUST00000210667 640 ntBASIC12.96□□□□□ -0.33
Cldn1O88551 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldn1O88551 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldn1O88551 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cldn1O88551 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.96□□□□□ -0.34
Cldn1O88551 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Cldn1O88551 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldn1O88551 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.96□□□□□ -0.34
Cldn1O88551 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cldn1O88551 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cldn1O88551 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldn1O88551 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cldn1O88551 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cldn1O88551 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.95□□□□□ -0.34
Cldn1O88551 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.95□□□□□ -0.34
Cldn1O88551 Gm12151-201ENSMUST00000121374 290 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
Cldn1O88551 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 Gm10253-201ENSMUST00000194270 940 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 Gm18246-201ENSMUST00000221023 728 ntBASIC12.95□□□□□ -0.34
Cldn1O88551 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.95□□□□□ -0.34
Cldn1O88551 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cldn1O88551 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cldn1O88551 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Gm22065-201ENSMUST00000103753 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm22066-201ENSMUST00000103761 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24932-201ENSMUST00000103763 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24115-201ENSMUST00000103799 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm22190-201ENSMUST00000103827 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm22191-201ENSMUST00000103831 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24721-201ENSMUST00000103849 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm28018-201ENSMUST00000103869 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm26399-201ENSMUST00000103937 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Gm25349-201ENSMUST00000177728 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm23616-201ENSMUST00000177797 110 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms