Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Cops3O88543 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.57□□□□□ -0.24
Cops3O88543 Gm25745-201ENSMUST00000174945 133 ntBASIC13.57□□□□□ -0.24
Cops3O88543 Gm18622-201ENSMUST00000219361 595 ntBASIC13.57□□□□□ -0.24
Cops3O88543 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Cops3O88543 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cops3O88543 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops3O88543 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.57□□□□□ -0.24
Cops3O88543 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cops3O88543 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cops3O88543 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cops3O88543 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.56□□□□□ -0.24
Cops3O88543 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.56□□□□□ -0.24
Cops3O88543 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.56□□□□□ -0.24
Cops3O88543 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.56□□□□□ -0.24
Cops3O88543 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cops3O88543 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cops3O88543 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Cops3O88543 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cops3O88543 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cops3O88543 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Gm15165-201ENSMUST00000118140 502 ntBASIC13.55□□□□□ -0.24
Cops3O88543 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cops3O88543 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cops3O88543 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cops3O88543 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.55□□□□□ -0.24
Cops3O88543 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.55□□□□□ -0.24
Cops3O88543 Gm27867-201ENSMUST00000184778 125 ntBASIC13.55□□□□□ -0.24
Cops3O88543 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.55□□□□□ -0.24
Cops3O88543 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cops3O88543 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cops3O88543 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.54□□□□□ -0.24
Cops3O88543 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.54□□□□□ -0.24
Cops3O88543 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.54□□□□□ -0.24
Cops3O88543 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Gm7506-201ENSMUST00000207758 815 ntBASIC13.54□□□□□ -0.24
Cops3O88543 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms