Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm7399-201ENSMUST00000032395 858 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm29310-201ENSMUST00000185468 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21825-201ENSMUST00000185728 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm29109-201ENSMUST00000185895 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21896-201ENSMUST00000186520 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21873-201ENSMUST00000186728 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21794-201ENSMUST00000187056 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21880-201ENSMUST00000187275 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21826-201ENSMUST00000187451 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21198-201ENSMUST00000188393 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21749-201ENSMUST00000189343 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21901-201ENSMUST00000189568 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm29424-201ENSMUST00000189716 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm28599-201ENSMUST00000189838 694 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21867-201ENSMUST00000189917 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm29269-201ENSMUST00000190087 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21722-201ENSMUST00000190153 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm28423-201ENSMUST00000190701 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21899-201ENSMUST00000190745 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21910-201ENSMUST00000191163 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21849-201ENSMUST00000191571 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm28678-201ENSMUST00000191593 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm4857-201ENSMUST00000192718 785 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm20910-201ENSMUST00000193268 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm21871-201ENSMUST00000194621 696 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.6□□□□□ -0.07
Cacna1hO88427 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1hO88427 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1hO88427 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.59□□□□□ -0.07
Cacna1hO88427 Mir7654-201ENSMUST00000185082 70 ntBASIC14.59□□□□□ -0.07
Cacna1hO88427 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm5187-201ENSMUST00000117317 991 ntBASIC14.59□□□□□ -0.07
Cacna1hO88427 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm3961-201ENSMUST00000204425 994 ntBASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1hO88427 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1hO88427 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.58□□□□□ -0.07
Cacna1hO88427 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1hO88427 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1hO88427 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms