Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Mmp8O70138 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Mmp8O70138 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mmp8O70138 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.4■□□□□ 0.54
Mmp8O70138 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.4■□□□□ 0.54
Mmp8O70138 Gm4995-201ENSMUST00000117247 432 ntBASIC18.4■□□□□ 0.54
Mmp8O70138 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Mmp8O70138 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Mmp8O70138 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Mmp8O70138 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.4■□□□□ 0.54
Mmp8O70138 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Gm27301-201ENSMUST00000184012 127 ntBASIC18.4■□□□□ 0.54
Mmp8O70138 Gm8000-201ENSMUST00000188378 592 ntBASIC18.4■□□□□ 0.54
Mmp8O70138 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.4■□□□□ 0.54
Mmp8O70138 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.4■□□□□ 0.54
Mmp8O70138 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mmp8O70138 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mmp8O70138 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.39■□□□□ 0.53
Mmp8O70138 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.39■□□□□ 0.53
Mmp8O70138 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.39■□□□□ 0.53
Mmp8O70138 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.39■□□□□ 0.53
Mmp8O70138 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.39■□□□□ 0.53
Mmp8O70138 Gm10154-201ENSMUST00000084445 354 ntBASIC18.39■□□□□ 0.53
Mmp8O70138 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.39■□□□□ 0.53
Mmp8O70138 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Mmp8O70138 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mmp8O70138 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.38■□□□□ 0.53
Mmp8O70138 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.38■□□□□ 0.53
Mmp8O70138 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Mmp8O70138 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Mmp8O70138 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.38■□□□□ 0.53
Mmp8O70138 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Mmp8O70138 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mmp8O70138 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Mmp8O70138 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Mmp8O70138 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Mmp8O70138 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Mmp8O70138 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.37■□□□□ 0.53
Mmp8O70138 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.37■□□□□ 0.53
Mmp8O70138 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Mmp8O70138 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Mmp8O70138 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms