Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.94□□□□□ -0.5
Pde6dO55057 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pde6dO55057 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pde6dO55057 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pde6dO55057 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pde6dO55057 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.94□□□□□ -0.5
Pde6dO55057 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.94□□□□□ -0.5
Pde6dO55057 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.94□□□□□ -0.5
Pde6dO55057 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pde6dO55057 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.94□□□□□ -0.5
Pde6dO55057 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pde6dO55057 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pde6dO55057 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pde6dO55057 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pde6dO55057 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pde6dO55057 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Pde6dO55057 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pde6dO55057 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.93□□□□□ -0.5
Pde6dO55057 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pde6dO55057 Gm14722-201ENSMUST00000118943 689 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.93□□□□□ -0.5
Pde6dO55057 Gm10052-201ENSMUST00000168019 960 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.93□□□□□ -0.5
Pde6dO55057 Gm44430-201ENSMUST00000203376 995 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Gm20049-201ENSMUST00000219950 730 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Odf3b-204ENSMUST00000227834 930 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Gm7729-201ENSMUST00000050143 801 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pde6dO55057 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.93□□□□□ -0.5
Pde6dO55057 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pde6dO55057 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pde6dO55057 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Gm13474-201ENSMUST00000122466 815 ntBASIC11.92□□□□□ -0.5
Pde6dO55057 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pde6dO55057 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.92□□□□□ -0.5
Pde6dO55057 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.92□□□□□ -0.5
Pde6dO55057 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.92□□□□□ -0.5
Pde6dO55057 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pde6dO55057 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms