Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Gm12260-201ENSMUST00000122447 411 ntBASIC14.04□□□□□ -0.16
BckdkO55028 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.04□□□□□ -0.16
BckdkO55028 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.04□□□□□ -0.16
BckdkO55028 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.04□□□□□ -0.16
BckdkO55028 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BckdkO55028 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BckdkO55028 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
BckdkO55028 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.03□□□□□ -0.16
BckdkO55028 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.03□□□□□ -0.16
BckdkO55028 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.03□□□□□ -0.16
BckdkO55028 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BckdkO55028 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.03□□□□□ -0.16
BckdkO55028 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
BckdkO55028 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
BckdkO55028 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.02□□□□□ -0.16
BckdkO55028 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BckdkO55028 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Gm11594-201ENSMUST00000122313 162 ntBASIC14.02□□□□□ -0.17
BckdkO55028 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BckdkO55028 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.02□□□□□ -0.17
BckdkO55028 Gm27646-201ENSMUST00000183989 110 ntBASIC14.02□□□□□ -0.17
BckdkO55028 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.02□□□□□ -0.17
BckdkO55028 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.02□□□□□ -0.17
BckdkO55028 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BckdkO55028 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BckdkO55028 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
BckdkO55028 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BckdkO55028 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BckdkO55028 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BckdkO55028 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BckdkO55028 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BckdkO55028 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BckdkO55028 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BckdkO55028 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms