Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.98■□□□□ 0.47
Smarce1O54941 Gm12134-201ENSMUST00000122109 520 ntBASIC17.98■□□□□ 0.47
Smarce1O54941 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.98■□□□□ 0.47
Smarce1O54941 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Smarce1O54941 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.98■□□□□ 0.47
Smarce1O54941 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.98■□□□□ 0.47
Smarce1O54941 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smarce1O54941 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smarce1O54941 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Smarce1O54941 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smarce1O54941 Gm12644-201ENSMUST00000119935 606 ntBASIC17.97■□□□□ 0.47
Smarce1O54941 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Smarce1O54941 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.97■□□□□ 0.47
Smarce1O54941 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.97■□□□□ 0.47
Smarce1O54941 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Smarce1O54941 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Smarce1O54941 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarce1O54941 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.96■□□□□ 0.47
Smarce1O54941 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smarce1O54941 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Smarce1O54941 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarce1O54941 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.96■□□□□ 0.47
Smarce1O54941 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smarce1O54941 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarce1O54941 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Smarce1O54941 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.96■□□□□ 0.47
Smarce1O54941 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smarce1O54941 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarce1O54941 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smarce1O54941 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarce1O54941 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smarce1O54941 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.96■□□□□ 0.46
Smarce1O54941 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.96■□□□□ 0.46
Smarce1O54941 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms