Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.34■□□□□ 0.21
Per1O35973 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Gm8749-201ENSMUST00000117737 331 ntBASIC16.34■□□□□ 0.21
Per1O35973 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.34■□□□□ 0.21
Per1O35973 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.34■□□□□ 0.21
Per1O35973 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
Per1O35973 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Per1O35973 Gm18737-201ENSMUST00000173594 937 ntBASIC16.34■□□□□ 0.21
Per1O35973 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Per1O35973 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Per1O35973 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Per1O35973 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.34■□□□□ 0.21
Per1O35973 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Per1O35973 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Per1O35973 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.34■□□□□ 0.21
Per1O35973 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Per1O35973 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Per1O35973 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Per1O35973 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Per1O35973 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Per1O35973 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Per1O35973 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Per1O35973 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.33■□□□□ 0.2
Per1O35973 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Gm2810-201ENSMUST00000118681 990 ntBASIC16.33■□□□□ 0.2
Per1O35973 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.33■□□□□ 0.2
Per1O35973 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.33■□□□□ 0.2
Per1O35973 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Per1O35973 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.32■□□□□ 0.2
Per1O35973 Gm11543-201ENSMUST00000120758 370 ntBASIC16.32■□□□□ 0.2
Per1O35973 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.32■□□□□ 0.2
Per1O35973 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Per1O35973 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.32■□□□□ 0.2
Per1O35973 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.32■□□□□ 0.2
Per1O35973 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Per1O35973 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Per1O35973 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Per1O35973 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Per1O35973 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Per1O35973 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.31■□□□□ 0.2
Per1O35973 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Per1O35973 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Per1O35973 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.31■□□□□ 0.2
Per1O35973 Gm25287-201ENSMUST00000103846 110 ntBASIC16.31■□□□□ 0.2
Per1O35973 Gm22918-201ENSMUST00000103855 110 ntBASIC16.31■□□□□ 0.2
Per1O35973 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.31■□□□□ 0.2
Per1O35973 Gm43474-201ENSMUST00000196415 774 ntBASIC16.31■□□□□ 0.2
Per1O35973 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.31■□□□□ 0.2
Per1O35973 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Per1O35973 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms