Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.99■□□□□ 0.47
Hdac1O09106 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.99■□□□□ 0.47
Hdac1O09106 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Hdac1O09106 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.99■□□□□ 0.47
Hdac1O09106 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hdac1O09106 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.99■□□□□ 0.47
Hdac1O09106 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hdac1O09106 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac1O09106 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hdac1O09106 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Hdac1O09106 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hdac1O09106 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hdac1O09106 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hdac1O09106 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.98■□□□□ 0.47
Hdac1O09106 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.98■□□□□ 0.47
Hdac1O09106 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.98■□□□□ 0.47
Hdac1O09106 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac1O09106 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hdac1O09106 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac1O09106 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.97■□□□□ 0.47
Hdac1O09106 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.97■□□□□ 0.47
Hdac1O09106 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.97■□□□□ 0.47
Hdac1O09106 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.97■□□□□ 0.47
Hdac1O09106 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hdac1O09106 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hdac1O09106 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac1O09106 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.96■□□□□ 0.47
Hdac1O09106 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.96■□□□□ 0.47
Hdac1O09106 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Hdac1O09106 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hdac1O09106 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hdac1O09106 Gm12895-201ENSMUST00000122214 226 ntBASIC17.96■□□□□ 0.47
Hdac1O09106 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.96■□□□□ 0.47
Hdac1O09106 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.96■□□□□ 0.47
Hdac1O09106 Gm6296-201ENSMUST00000222599 943 ntBASIC17.96■□□□□ 0.47
Hdac1O09106 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hdac1O09106 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hdac1O09106 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.96■□□□□ 0.47
Hdac1O09106 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Hdac1O09106 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac1O09106 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac1O09106 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac1O09106 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac1O09106 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac1O09106 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac1O09106 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac1O09106 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms