Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sh2b3O09039 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.46□□□□□ -0.26
Sh2b3O09039 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.45□□□□□ -0.26
Sh2b3O09039 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 BC037039-201ENSMUST00000192003 2205 ntBASIC13.45□□□□□ -0.26
Sh2b3O09039 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sh2b3O09039 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh2b3O09039 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh2b3O09039 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh2b3O09039 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh2b3O09039 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.44□□□□□ -0.26
Sh2b3O09039 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.44□□□□□ -0.26
Sh2b3O09039 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.44□□□□□ -0.26
Sh2b3O09039 Gm4899-201ENSMUST00000178708 719 ntBASIC13.44□□□□□ -0.26
Sh2b3O09039 Gm19164-201ENSMUST00000210667 640 ntBASIC13.44□□□□□ -0.26
Sh2b3O09039 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.44□□□□□ -0.26
Sh2b3O09039 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.44□□□□□ -0.26
Sh2b3O09039 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh2b3O09039 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Gm27300-201ENSMUST00000184085 97 ntBASIC13.43□□□□□ -0.26
Sh2b3O09039 Gm27335-201ENSMUST00000184758 97 ntBASIC13.43□□□□□ -0.26
Sh2b3O09039 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.43□□□□□ -0.26
Sh2b3O09039 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.43□□□□□ -0.26
Sh2b3O09039 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.43□□□□□ -0.26
Sh2b3O09039 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms